Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00142700 | CKAN_00714100 | A0A3S3MQT6 | A0A3S3MEY1 | Acetyl-coenzyme A synthetase. | Nitrate reductase NADH-like protein. | 0.709 |
CKAN_00142700 | CKAN_01009500 | A0A3S3MQT6 | A0A443NSC9 | Acetyl-coenzyme A synthetase. | Kynurenine formamidase. | 0.757 |
CKAN_00142700 | CKAN_01923800 | A0A3S3MQT6 | A0A443PHA0 | Acetyl-coenzyme A synthetase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.709 |
CKAN_00142700 | CKAN_02157200 | A0A3S3MQT6 | A0A3S3NCE6 | Acetyl-coenzyme A synthetase. | FAD-dependent urate hydroxylase-like protein. | 0.728 |
CKAN_00142700 | CKAN_02206300 | A0A3S3MQT6 | A0A443PPZ2 | Acetyl-coenzyme A synthetase. | Nitrate reductase 2. | 0.709 |
CKAN_00142700 | CKAN_02206400 | A0A3S3MQT6 | A0A443PQ02 | Acetyl-coenzyme A synthetase. | Nitrate reductase NADH-like protein. | 0.709 |
CKAN_00543500 | CKAN_00714100 | A0A3S3MXV9 | A0A3S3MEY1 | Magnesium protoporphyrin IX methyltransferase, chloroplastic. | Nitrate reductase NADH-like protein. | 0.416 |
CKAN_00543500 | CKAN_01923800 | A0A3S3MXV9 | A0A443PHA0 | Magnesium protoporphyrin IX methyltransferase, chloroplastic. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.416 |
CKAN_00543500 | CKAN_02157200 | A0A3S3MXV9 | A0A3S3NCE6 | Magnesium protoporphyrin IX methyltransferase, chloroplastic. | FAD-dependent urate hydroxylase-like protein. | 0.798 |
CKAN_00543500 | CKAN_02206300 | A0A3S3MXV9 | A0A443PPZ2 | Magnesium protoporphyrin IX methyltransferase, chloroplastic. | Nitrate reductase 2. | 0.416 |
CKAN_00543500 | CKAN_02206400 | A0A3S3MXV9 | A0A443PQ02 | Magnesium protoporphyrin IX methyltransferase, chloroplastic. | Nitrate reductase NADH-like protein. | 0.416 |
CKAN_00714100 | CKAN_00142700 | A0A3S3MEY1 | A0A3S3MQT6 | Nitrate reductase NADH-like protein. | Acetyl-coenzyme A synthetase. | 0.709 |
CKAN_00714100 | CKAN_00543500 | A0A3S3MEY1 | A0A3S3MXV9 | Nitrate reductase NADH-like protein. | Magnesium protoporphyrin IX methyltransferase, chloroplastic. | 0.416 |
CKAN_00714100 | CKAN_01140900 | A0A3S3MEY1 | A0A3S3MMJ6 | Nitrate reductase NADH-like protein. | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | 0.463 |
CKAN_00714100 | CKAN_01923800 | A0A3S3MEY1 | A0A443PHA0 | Nitrate reductase NADH-like protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.999 |
CKAN_00714100 | CKAN_02157200 | A0A3S3MEY1 | A0A3S3NCE6 | Nitrate reductase NADH-like protein. | FAD-dependent urate hydroxylase-like protein. | 0.800 |
CKAN_00714100 | CKAN_02206300 | A0A3S3MEY1 | A0A443PPZ2 | Nitrate reductase NADH-like protein. | Nitrate reductase 2. | 0.999 |
CKAN_00714100 | CKAN_02206400 | A0A3S3MEY1 | A0A443PQ02 | Nitrate reductase NADH-like protein. | Nitrate reductase NADH-like protein. | 0.999 |
CKAN_00714100 | COQ3 | A0A3S3MEY1 | A0A3S3MSY1 | Nitrate reductase NADH-like protein. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | 0.416 |
CKAN_00855000 | CKAN_02157200 | A0A3S3MHC7 | A0A3S3NCE6 | Violaxanthin de-epoxidase, chloroplastic isoform X1; Belongs to the calycin superfamily. Lipocalin family. | FAD-dependent urate hydroxylase-like protein. | 0.739 |
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