STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00568400Protein RIK isoform X1. (614 aa)    
Predicted Functional Partners:
CKAN_00695500
/SPRY domain-containing protein.
      
 0.542
CKAN_01438600
Transcription factor AS1.
    
 
 0.506
CKAN_00362100
Pre-mRNA splicing factor SR-like protein 1 isoform X1.
   
    0.504
CKAN_02085900
Cell division cycle 5-like protein.
    
 
 0.502
CKAN_01959100
Beta-catenin-like protein 1.
      
 0.478
CKAN_01908300
Zinc finger protein ZOP1.
      
 0.477
CKAN_01851100
Protein CWC15.
      
 0.475
CKAN_02416400
WW domain-containing protein.
   
 
 0.451
CKAN_01504700
WW domain-containing protein.
   
 
 0.451
CKAN_02531500
K Homology domain-containing protein.
    
 
 0.443
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.