STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01462700UPF0187 protein, chloroplastic-like protein. (199 aa)    
Predicted Functional Partners:
CKAN_00714100
Nitrate reductase NADH-like protein.
    
 0.824
CKAN_01923800
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.824
CKAN_02206300
Nitrate reductase 2.
    
 0.824
CKAN_02206400
Nitrate reductase NADH-like protein.
    
 0.824
CKAN_00725300
Elongation factor 1-gamma 2.
    
 0.723
CKAN_00437700
Beta-Casp domain-containing protein.
    
 0.720
CKAN_00344400
Cleavage and polyadenylation specificity factor subunit 3-II.
    
 0.707
CKAN_01074800
Protein SIEL isoform X1.
    
 0.683
CKAN_02501500
SET domain-containing protein.
    
 0.673
CKAN_00137300
Integrator complex subunit 3 isoform X1.
    
 0.667
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.