Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00593700 | CKAN_02255600 | A0A3S3MCV8 | A0A3S3NE62 | ADP,ATP carrier protein. | Glutaredoxin domain-containing protein. | 0.497 |
CKAN_01201900 | CKAN_02255600 | A0A3S3NNG0 | A0A3S3NE62 | Glutathione S-transferase DHAR3, chloroplastic; Belongs to the GST superfamily. | Glutaredoxin domain-containing protein. | 0.497 |
CKAN_01532300 | CKAN_02255600 | A0A3S4P6U5 | A0A3S3NE62 | Adenylyl cyclase-associated protein; Belongs to the CAP family. | Glutaredoxin domain-containing protein. | 0.681 |
CKAN_01964400 | CKAN_01990400 | A0A3S3P0P3 | A0A3S3MVR3 | Transcription factor. | Cytochrome P450 89A2. | 0.412 |
CKAN_01964400 | CKAN_02255600 | A0A3S3P0P3 | A0A3S3NE62 | Transcription factor. | Glutaredoxin domain-containing protein. | 0.435 |
CKAN_01990400 | CKAN_01964400 | A0A3S3MVR3 | A0A3S3P0P3 | Cytochrome P450 89A2. | Transcription factor. | 0.412 |
CKAN_01990400 | CKAN_02255600 | A0A3S3MVR3 | A0A3S3NE62 | Cytochrome P450 89A2. | Glutaredoxin domain-containing protein. | 0.488 |
CKAN_02255600 | CKAN_00593700 | A0A3S3NE62 | A0A3S3MCV8 | Glutaredoxin domain-containing protein. | ADP,ATP carrier protein. | 0.497 |
CKAN_02255600 | CKAN_01201900 | A0A3S3NE62 | A0A3S3NNG0 | Glutaredoxin domain-containing protein. | Glutathione S-transferase DHAR3, chloroplastic; Belongs to the GST superfamily. | 0.497 |
CKAN_02255600 | CKAN_01532300 | A0A3S3NE62 | A0A3S4P6U5 | Glutaredoxin domain-containing protein. | Adenylyl cyclase-associated protein; Belongs to the CAP family. | 0.681 |
CKAN_02255600 | CKAN_01964400 | A0A3S3NE62 | A0A3S3P0P3 | Glutaredoxin domain-containing protein. | Transcription factor. | 0.435 |
CKAN_02255600 | CKAN_01990400 | A0A3S3NE62 | A0A3S3MVR3 | Glutaredoxin domain-containing protein. | Cytochrome P450 89A2. | 0.488 |
CKAN_02255600 | CKAN_02506600 | A0A3S3NE62 | A0A3S3NID0 | Glutaredoxin domain-containing protein. | Adenylyl cyclase-associated protein; Belongs to the CAP family. | 0.681 |
CKAN_02506600 | CKAN_02255600 | A0A3S3NID0 | A0A3S3NE62 | Adenylyl cyclase-associated protein; Belongs to the CAP family. | Glutaredoxin domain-containing protein. | 0.681 |