STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00644300RNA recognition motif domain-containing protein. (380 aa)    
Predicted Functional Partners:
CKAN_02659900
RNA recognition motif domain-containing protein.
  
 
 0.873
CKAN_00868800
Transportin-1 isoform X1.
    
 
 0.774
CKAN_01141100
Zinc finger CCCH domain-containing protein 14.
    
 
 0.773
CKAN_01156800
RNA recognition motif domain-containing protein.
    
 
 0.773
CKAN_00627100
RNA recognition motif domain-containing protein.
    
 
 0.773
CKAN_00722100
ELAV-like protein 1 isoform X1.
  
 
0.626
CKAN_00793500
Heterogeneous nuclear ribonucleoprotein A1-like protein 2.
  
 
0.618
CKAN_00268500
Glycine-rich RNA-binding protein 3, mitochondrial.
  
 
0.606
CKAN_00968200
Ribonucleoprotein A, chloroplastic.
  
 
 0.599
CKAN_01571400
Ribonucleoprotein A, chloroplastic.
  
 
 0.585
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.