Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CKAN_00676800Amino acid permease 8-like protein. (439 aa)    
Predicted Functional Partners:
CKAN_01562700
Amino acid/polyamine transporter I.
    
 
 0.630
CKAN_01012000
Snakin-1.
     
 0.602
CKAN_00595100
Putative 2-oxoglutarate-dependent dioxygenase AOP1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.588
CKAN_01317400
PAH domain-containing protein/Sin3_corepress domain-containing protein.
    
 0.577
CKAN_02015000
Paired amphipathic helix protein Sin3-like protein 4 isoform X1.
    
 0.577
CKAN_02382100
WAT1-related protein.
      
 0.569
CKAN_00990100
Protein NRT1/ PTR FAMILY 5.1.
    
 
 0.554
CKAN_02625900
Amino acid transporter.
      
 0.549
CKAN_00446700
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.518
CKAN_00595200
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.514
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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