STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02005400Pyridoxal phosphate-dependent decarboxylase. (136 aa)    
Predicted Functional Partners:
CKAN_01502300
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
    
 0.919
CKAN_00714100
Nitrate reductase NADH-like protein.
   
 0.792
CKAN_01923800
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.792
CKAN_02206300
Nitrate reductase 2.
   
 0.792
CKAN_02206400
Nitrate reductase NADH-like protein.
   
 0.792
CKAN_01756200
Putative gamma-aminobutyrate transaminase 3, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.772
CKAN_00697300
Alanine--glyoxylate aminotransferase 2 1, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.772
CKAN_00756100
Alanine--glyoxylate aminotransferase 2 2, mitochondrial-like protein isoform X2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.772
CKAN_00992100
Alanine--glyoxylate aminotransferase 2 3, mitochondrial.
  
 0.772
CKAN_02506900
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.725
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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