STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02327800Zinc finger BED domain-containing protein DAYSLEEPER isoform X1. (680 aa)    
Predicted Functional Partners:
CKAN_01174100
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.536
CKAN_01766500
Uncharacterized protein.
  
 
   0.521
CKAN_01765500
Uncharacterized protein.
  
 
   0.520
CKAN_00109400
BED-type domain-containing protein.
  
 
   0.520
CKAN_00847400
BED-type domain-containing protein.
  
 
   0.519
CKAN_02697700
HAT transposon superfamily isoform 2.
  
 
   0.513
CKAN_01232700
BED-type domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
  
 
   0.510
CKAN_02636600
BED-type domain-containing protein.
  
 
   0.508
CKAN_02140800
Uncharacterized protein.
  
 
   0.496
CKAN_00875300
Uncharacterized protein.
  
 
   0.496
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.