STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00762900Eukaryotic translation initiation factor 2 subunit beta. (252 aa)    
Predicted Functional Partners:
CKAN_00636700
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.997
CKAN_01161900
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.997
CKAN_02284600
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 0.995
CKAN_01502100
Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.995
CKAN_00334400
Translation initiation factor eIF-2B subunit epsilon.
   
 0.993
CKAN_00310300
Translation initiation factor eIF-2B subunit gamma.
   
 0.993
CKAN_02521000
Translation initiation factor eIF-2B subunit alpha-like protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.993
CKAN_02093700
Eukaryotic translation initiation factor 2 subunit gamma-like protein.
   
 0.993
CKAN_00848100
Translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.993
CKAN_02461400
Eukaryotic translation initiation factor 2 subunit gamma-like protein.
   
 0.993
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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