Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00446700 | CKAN_01622800 | A0A443NC06 | A0A3S3NGR7 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | Pentatricopeptide repeat. | 0.463 |
CKAN_00446700 | CKAN_02345900 | A0A443NC06 | A0A3S3N1P8 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.993 |
CKAN_01131400 | CKAN_01603900 | A0A443NVL8 | A0A3S3N2N6 | Transcription termination factor MTERF2, chloroplastic isoform X2. | RAP domain-containing protein, chloroplastic. | 0.481 |
CKAN_01131400 | CKAN_01622800 | A0A443NVL8 | A0A3S3NGR7 | Transcription termination factor MTERF2, chloroplastic isoform X2. | Pentatricopeptide repeat. | 0.410 |
CKAN_01603900 | CKAN_01131400 | A0A3S3N2N6 | A0A443NVL8 | RAP domain-containing protein, chloroplastic. | Transcription termination factor MTERF2, chloroplastic isoform X2. | 0.481 |
CKAN_01603900 | CKAN_01622800 | A0A3S3N2N6 | A0A3S3NGR7 | RAP domain-containing protein, chloroplastic. | Pentatricopeptide repeat. | 0.409 |
CKAN_01603900 | CKAN_02067300 | A0A3S3N2N6 | A0A3S3NAT0 | RAP domain-containing protein, chloroplastic. | DUF632 domain-containing protein/DUF630 domain-containing protein. | 0.406 |
CKAN_01622800 | CKAN_00446700 | A0A3S3NGR7 | A0A443NC06 | Pentatricopeptide repeat. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.463 |
CKAN_01622800 | CKAN_01131400 | A0A3S3NGR7 | A0A443NVL8 | Pentatricopeptide repeat. | Transcription termination factor MTERF2, chloroplastic isoform X2. | 0.410 |
CKAN_01622800 | CKAN_01603900 | A0A3S3NGR7 | A0A3S3N2N6 | Pentatricopeptide repeat. | RAP domain-containing protein, chloroplastic. | 0.409 |
CKAN_01622800 | CKAN_02067300 | A0A3S3NGR7 | A0A3S3NAT0 | Pentatricopeptide repeat. | DUF632 domain-containing protein/DUF630 domain-containing protein. | 0.515 |
CKAN_01622800 | CKAN_02345900 | A0A3S3NGR7 | A0A3S3N1P8 | Pentatricopeptide repeat. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.432 |
CKAN_02067300 | CKAN_01603900 | A0A3S3NAT0 | A0A3S3N2N6 | DUF632 domain-containing protein/DUF630 domain-containing protein. | RAP domain-containing protein, chloroplastic. | 0.406 |
CKAN_02067300 | CKAN_01622800 | A0A3S3NAT0 | A0A3S3NGR7 | DUF632 domain-containing protein/DUF630 domain-containing protein. | Pentatricopeptide repeat. | 0.515 |
CKAN_02345900 | CKAN_00446700 | A0A3S3N1P8 | A0A443NC06 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.993 |
CKAN_02345900 | CKAN_01622800 | A0A3S3N1P8 | A0A3S3NGR7 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | Pentatricopeptide repeat. | 0.432 |