STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02422000DNA oxidative demethylase ALKBH2-like protein. (201 aa)    
Predicted Functional Partners:
CKAN_00639900
Putative starch synthase 4, chloroplastic/amyloplastic isoform X1.
  
 
 0.864
CKAN_00125600
Soluble starch synthase 3.
  
 
 0.864
CKAN_01114500
Ornithine carbamoyltransferase, chloroplastic-like protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.828
CKAN_01892200
4-alpha-glucanotransferase.
  
 
 0.817
CKAN_00449300
4-alpha-glucanotransferase DPE2.
  
 
 0.817
CKAN_02579500
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.815
CKAN_00571300
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.815
CKAN_02130900
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.815
CKAN_00358200
Isoamylase 1, chloroplastic.
  
 
 0.804
CKAN_01105600
1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic isoform X1.
  
 
 0.804
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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