STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01654800Peroxisomal membrane protein 11C. (245 aa)    
Predicted Functional Partners:
CKAN_00930100
Peroxisome biogenesis protein 19-1-like protein isoform X2.
   
 0.930
CKAN_01445600
Peroxisomal membrane protein PEX14 isoform X1.
    
 0.804
CKAN_01071400
Peroxisomal membrane protein PEX14-like protein isoform X3.
    
 0.804
CKAN_02592500
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.801
CKAN_01072900
Peroxisome biogenesis protein 3-2-like protein.
   
 0.765
CKAN_01653000
Peroxisomal membrane protein PEX16.
   
 
 0.719
CKAN_00847700
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
    
 0.705
CKAN_00300800
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
    
 0.705
CKAN_01416500
ABC transporter-like protein.
   
 
 0.628
CKAN_01096200
ABC transporter D family member 1.
   
 
 0.628
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.