STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02179000Heat stress transcription factor B-4-like protein. (345 aa)    
Predicted Functional Partners:
CKAN_01213300
NAD-dependent protein deacetylase SRT1.
    
 0.601
CKAN_00755900
WD40 repeat.
    
 0.588
CKAN_01072000
WD40 repeat.
     
 0.568
CKAN_02395900
CS domain-containing protein.
    
 0.564
CKAN_00431000
Putative HSP90 co-chaperone.
    
 0.564
CKAN_01428100
CS domain-containing protein.
    
 0.564
CKAN_02345200
Mitochondrial import inner membrane translocase subunit tim44-2.
    
 0.564
CKAN_00641600
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.550
CKAN_00252700
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
    
 0.550
CKAN_02732500
Serine/threonine-protein kinase TOR.
    
 0.550
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.