STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01020800Protein kinase domain-containing protein. (639 aa)    
Predicted Functional Partners:
CKAN_00635600
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
    
 0.539
CKAN_00038200
Putative LRR receptor-like serine/threonine-protein kinase isoform X1.
    
 
0.532
CKAN_00332900
Ultraviolet-B receptor UVR8-like protein isoform X1.
   
 
 0.523
CKAN_00079100
UPF0587 protein.
      
 0.509
CKAN_02078900
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.505
CKAN_02419500
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.505
CKAN_02198300
Regulator of chromosome condensation.
   
 
 0.501
CKAN_02286100
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.483
CKAN_00032500
Ultraviolet-B receptor UVR8-like protein.
   
 
 0.455
CKAN_00177800
Guanine nucleotide exchange factor SRM1 isoform X3.
   
 
 0.455
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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