STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01065100Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)    
Predicted Functional Partners:
CKAN_01496700
Triosephosphate isomerase, cytosolic.
 
 0.988
CKAN_02150100
Triosephosphate isomerase, chloroplastic isoform X1.
 
 0.988
CKAN_00518900
Triosephosphate isomerase.
 
 0.987
CKAN_00563000
Ketose-bisphosphate aldolase.
  
 0.961
CKAN_01649800
Enolase.
  
 0.945
CKAN_00934400
Enolase.
  
 0.945
CKAN_01387600
Enolase 1, chloroplastic.
  
 0.945
CKAN_01506900
Cytosolic enolase 3 isoform X1.
  
 0.945
CKAN_00777900
Triosephosphate isomerase, chloroplastic-like protein.
 
 0.934
CKAN_00766600
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
  
 
 0.896
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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