Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00282700 | CKAN_01122000 | A0A443N7N3 | A0A3S3NM63 | Small nuclear ribonucleoprotein-associated protein B. | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | 0.469 |
CKAN_00282700 | CKAN_01337700 | A0A443N7N3 | A0A443P1D8 | Small nuclear ribonucleoprotein-associated protein B. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.999 |
CKAN_00282700 | CKAN_01378900 | A0A443N7N3 | A0A3S3MYM5 | Small nuclear ribonucleoprotein-associated protein B. | Receptor-like protein 12 isoform X1. | 0.469 |
CKAN_00282700 | CKAN_02250400 | A0A443N7N3 | A0A443PR80 | Small nuclear ribonucleoprotein-associated protein B. | LRR receptor-like serine/threonine-protein kinase GSO1. | 0.469 |
CKAN_00282700 | CKAN_02342800 | A0A443N7N3 | A0A443PTQ3 | Small nuclear ribonucleoprotein-associated protein B. | Putative small nuclear ribonucleoprotein F. | 0.999 |
CKAN_00282700 | CKAN_02706200 | A0A443N7N3 | A0A443Q3P8 | Small nuclear ribonucleoprotein-associated protein B. | MDIS1-interacting receptor like kinase 2-like protein. | 0.469 |
CKAN_00725300 | CKAN_01122000 | A0A3S3MSA1 | A0A3S3NM63 | Elongation factor 1-gamma 2. | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | 0.528 |
CKAN_00725300 | CKAN_01337700 | A0A3S3MSA1 | A0A443P1D8 | Elongation factor 1-gamma 2. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.448 |
CKAN_00725300 | CKAN_01378900 | A0A3S3MSA1 | A0A3S3MYM5 | Elongation factor 1-gamma 2. | Receptor-like protein 12 isoform X1. | 0.528 |
CKAN_00725300 | CKAN_02250400 | A0A3S3MSA1 | A0A443PR80 | Elongation factor 1-gamma 2. | LRR receptor-like serine/threonine-protein kinase GSO1. | 0.528 |
CKAN_00725300 | CKAN_02706200 | A0A3S3MSA1 | A0A443Q3P8 | Elongation factor 1-gamma 2. | MDIS1-interacting receptor like kinase 2-like protein. | 0.528 |
CKAN_01122000 | CKAN_00282700 | A0A3S3NM63 | A0A443N7N3 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | Small nuclear ribonucleoprotein-associated protein B. | 0.469 |
CKAN_01122000 | CKAN_00725300 | A0A3S3NM63 | A0A3S3MSA1 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | Elongation factor 1-gamma 2. | 0.528 |
CKAN_01122000 | CKAN_01337700 | A0A3S3NM63 | A0A443P1D8 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.474 |
CKAN_01122000 | CKAN_01378900 | A0A3S3NM63 | A0A3S3MYM5 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | Receptor-like protein 12 isoform X1. | 0.483 |
CKAN_01122000 | CKAN_01766600 | A0A3S3NM63 | A0A443PCZ9 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | Uncharacterized protein. | 0.450 |
CKAN_01122000 | CKAN_02250400 | A0A3S3NM63 | A0A443PR80 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | LRR receptor-like serine/threonine-protein kinase GSO1. | 0.447 |
CKAN_01122000 | CKAN_02342800 | A0A3S3NM63 | A0A443PTQ3 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | Putative small nuclear ribonucleoprotein F. | 0.469 |
CKAN_01122000 | CKAN_02565100 | A0A3S3NM63 | A0A443PZR2 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase. | 0.461 |
CKAN_01122000 | CKAN_02700700 | A0A3S3NM63 | A0A443Q3G7 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2. | Non-specific serine/threonine protein kinase. | 0.476 |
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