STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02453400Reticulon-like protein. (613 aa)    
Predicted Functional Partners:
CKAN_01027600
Methylsterol monooxygenase 2-2; Belongs to the sterol desaturase family.
   
 0.962
CKAN_01501500
Methylsterol monooxygenase 2-2; Belongs to the sterol desaturase family.
   
 0.962
CKAN_00432300
Cytochrome P450; Belongs to the cytochrome P450 family.
 
 
 0.954
CKAN_02312200
Sterol 14-demethylase; Belongs to the cytochrome P450 family.
 
 
 0.954
CKAN_01243600
Methylsterol monooxygenase 1-1-like protein; Belongs to the sterol desaturase family.
   
 0.948
CKAN_01243200
Fatty acid hydroxylase; Belongs to the sterol desaturase family.
   
 0.948
CKAN_00421200
Fatty acid hydroxylase; Belongs to the sterol desaturase family.
   
 0.948
CKAN_01556500
Methylsterol monooxygenase 1-1-like protein; Belongs to the sterol desaturase family.
   
 0.948
CKAN_01140900
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.925
CKAN_00229800
Ergosterol biosynthetic protein 28.
   
 
 0.908
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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