STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02033000Early nodulin-like protein 1. (190 aa)    
Predicted Functional Partners:
CKAN_01248900
NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
  0.777
CKAN_02446100
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.742
CKAN_01317200
Photosystem II PsbQ.
    
   0.724
CKAN_02031200
Photosynthetic NDH subunit of subcomplex B 1, chloroplastic.
   
 
 0.718
CKAN_01789800
Photosynthetic NDH subunit of subcomplex B 5, chloroplastic.
   
 
 0.714
CKAN_00687600
Photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like protein.
    
 
 0.708
CKAN_00765600
NADPH-quinone oxidoreductase subunit N, chloroplastic.
   
   0.708
CKAN_01062100
Photosystem I reaction center subunit III, chloroplastic.
    
   0.705
CKAN_01052600
Photosystem I reaction center subunit psaK, chloroplastic.
    
   0.705
CKAN_02507800
4Fe-4S binding domain-containing protein.
    
   0.687
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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