Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00621000 | CKAN_02077600 | A0A3S3MJS1 | A0A3S3NP85 | Prohibitin. | Peptidase M41. | 0.759 |
CKAN_00621000 | CKAN_02580600 | A0A3S3MJS1 | A0A3S4PYE0 | Prohibitin. | Prohibitin. | 0.998 |
CKAN_00865100 | CKAN_01282300 | A0A3S3Q649 | A0A443NZU7 | 50S ribosomal protein L27, chloroplastic. | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | 0.993 |
CKAN_00865100 | CKAN_01534900 | A0A3S3Q649 | A0A3S3MMQ4 | 50S ribosomal protein L27, chloroplastic. | Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | 0.989 |
CKAN_00865100 | CKAN_01535800 | A0A3S3Q649 | A0A443P6R2 | 50S ribosomal protein L27, chloroplastic. | 30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. | 0.979 |
CKAN_00865100 | CKAN_01636500 | A0A3S3Q649 | A0A3S3MW89 | 50S ribosomal protein L27, chloroplastic. | 39S ribosomal protein L22, mitochondrial-like protein; Belongs to the universal ribosomal protein uL22 family. | 0.989 |
CKAN_00865100 | CKAN_02077600 | A0A3S3Q649 | A0A3S3NP85 | 50S ribosomal protein L27, chloroplastic. | Peptidase M41. | 0.746 |
CKAN_00865100 | CKAN_02266600 | A0A3S3Q649 | A0A443PRL9 | 50S ribosomal protein L27, chloroplastic. | Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family. | 0.987 |
CKAN_00865100 | CKAN_02657800 | A0A3S3Q649 | A0A443Q2A4 | 50S ribosomal protein L27, chloroplastic. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.994 |
CKAN_01153300 | CKAN_02077600 | A0A443NW82 | A0A3S3NP85 | Prohibitin. | Peptidase M41. | 0.759 |
CKAN_01153300 | CKAN_02580600 | A0A443NW82 | A0A3S4PYE0 | Prohibitin. | Prohibitin. | 0.998 |
CKAN_01282300 | CKAN_00865100 | A0A443NZU7 | A0A3S3Q649 | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L27, chloroplastic. | 0.993 |
CKAN_01282300 | CKAN_01534900 | A0A443NZU7 | A0A3S3MMQ4 | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | 0.991 |
CKAN_01282300 | CKAN_01535800 | A0A443NZU7 | A0A443P6R2 | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | 30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. | 0.969 |
CKAN_01282300 | CKAN_01636500 | A0A443NZU7 | A0A3S3MW89 | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | 39S ribosomal protein L22, mitochondrial-like protein; Belongs to the universal ribosomal protein uL22 family. | 0.994 |
CKAN_01282300 | CKAN_02077600 | A0A443NZU7 | A0A3S3NP85 | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | Peptidase M41. | 0.760 |
CKAN_01282300 | CKAN_02266600 | A0A443NZU7 | A0A443PRL9 | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family. | 0.991 |
CKAN_01282300 | CKAN_02657800 | A0A443NZU7 | A0A443Q2A4 | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.997 |
CKAN_01534900 | CKAN_00865100 | A0A3S3MMQ4 | A0A3S3Q649 | Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | 50S ribosomal protein L27, chloroplastic. | 0.989 |
CKAN_01534900 | CKAN_01282300 | A0A3S3MMQ4 | A0A443NZU7 | Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | 0.991 |
page 1 of 4