STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00112700Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic. (156 aa)    
Predicted Functional Partners:
CKAN_00899900
Chlororespiratory reduction 42.
   
  
 0.629
CKAN_00765600
NADPH-quinone oxidoreductase subunit N, chloroplastic.
   
  
 0.617
CKAN_02031200
Photosynthetic NDH subunit of subcomplex B 1, chloroplastic.
  
  
 0.608
CKAN_00717400
NADPH-quinone oxidoreductase subunit M, chloroplastic.
  
  
 0.593
CKAN_02019300
Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic.
   
  
 0.536
CKAN_00393500
Dihydrodipicolinate reductase-like protein CRR1, chloroplastic.
   
  
 0.534
CKAN_02199800
NADPH-quinone oxidoreductase subunit M, chloroplastic.
  
  
 0.534
CKAN_01300200
Mitochondrial import inner membrane translocase subunit tim-10 isoform 1.
   
  
 0.524
CKAN_00687600
Photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like protein.
   
  
 0.520
CKAN_00901700
Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5.
   
  
 0.519
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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