Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00239300 | CKAN_00498600 | A0A3S3NS08 | A0A3S4NFH8 | Geranylgeranyl diphosphate reductase, chloroplastic. | Electron transfer flavoprotein. | 0.900 |
CKAN_00239300 | CKAN_00827300 | A0A3S3NS08 | A0A3S4NNW7 | Geranylgeranyl diphosphate reductase, chloroplastic. | Aromatic-ring hydroxylase-like protein. | 0.877 |
CKAN_00239300 | CKAN_00928500 | A0A3S3NS08 | A0A3S5WGN8 | Geranylgeranyl diphosphate reductase, chloroplastic. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.412 |
CKAN_00239300 | CKAN_01517600 | A0A3S3NS08 | A0A3S3P9U6 | Geranylgeranyl diphosphate reductase, chloroplastic. | Acyl-coenzyme A oxidase 4, peroxisomal. | 0.412 |
CKAN_00239300 | CKAN_01638200 | A0A3S3NS08 | A0A443P9J3 | Geranylgeranyl diphosphate reductase, chloroplastic. | Peroxisomal acyl-coenzyme A oxidase 1. | 0.412 |
CKAN_00239300 | CKAN_02492000 | A0A3S3NS08 | A0A443PXT1 | Geranylgeranyl diphosphate reductase, chloroplastic. | Isovaleryl-CoA dehydrogenase, mitochondrial. | 0.412 |
CKAN_00239300 | CKAN_02492600 | A0A3S3NS08 | A0A443PXT5 | Geranylgeranyl diphosphate reductase, chloroplastic. | Isovaleryl-CoA dehydrogenase, mitochondrial. | 0.412 |
CKAN_00239300 | CKAN_02507800 | A0A3S3NS08 | A0A3S3R7R8 | Geranylgeranyl diphosphate reductase, chloroplastic. | 4Fe-4S binding domain-containing protein. | 0.524 |
CKAN_00239300 | CKAN_02517500 | A0A3S3NS08 | A0A3S3R5V3 | Geranylgeranyl diphosphate reductase, chloroplastic. | Uncharacterized protein. | 0.412 |
CKAN_00239300 | CKAN_02618000 | A0A3S3NS08 | A0A3S3NQP3 | Geranylgeranyl diphosphate reductase, chloroplastic. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.885 |
CKAN_00498600 | CKAN_00239300 | A0A3S4NFH8 | A0A3S3NS08 | Electron transfer flavoprotein. | Geranylgeranyl diphosphate reductase, chloroplastic. | 0.900 |
CKAN_00498600 | CKAN_00827300 | A0A3S4NFH8 | A0A3S4NNW7 | Electron transfer flavoprotein. | Aromatic-ring hydroxylase-like protein. | 0.900 |
CKAN_00498600 | CKAN_00928500 | A0A3S4NFH8 | A0A3S5WGN8 | Electron transfer flavoprotein. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.988 |
CKAN_00498600 | CKAN_01517600 | A0A3S4NFH8 | A0A3S3P9U6 | Electron transfer flavoprotein. | Acyl-coenzyme A oxidase 4, peroxisomal. | 0.990 |
CKAN_00498600 | CKAN_01638200 | A0A3S4NFH8 | A0A443P9J3 | Electron transfer flavoprotein. | Peroxisomal acyl-coenzyme A oxidase 1. | 0.988 |
CKAN_00498600 | CKAN_02492000 | A0A3S4NFH8 | A0A443PXT1 | Electron transfer flavoprotein. | Isovaleryl-CoA dehydrogenase, mitochondrial. | 0.991 |
CKAN_00498600 | CKAN_02492600 | A0A3S4NFH8 | A0A443PXT5 | Electron transfer flavoprotein. | Isovaleryl-CoA dehydrogenase, mitochondrial. | 0.991 |
CKAN_00498600 | CKAN_02507800 | A0A3S4NFH8 | A0A3S3R7R8 | Electron transfer flavoprotein. | 4Fe-4S binding domain-containing protein. | 0.729 |
CKAN_00498600 | CKAN_02517500 | A0A3S4NFH8 | A0A3S3R5V3 | Electron transfer flavoprotein. | Uncharacterized protein. | 0.987 |
CKAN_00498600 | CKAN_02618000 | A0A3S4NFH8 | A0A3S3NQP3 | Electron transfer flavoprotein. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.996 |
page 1 of 6