STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00202500Beta-hexosaminidase. (580 aa)    
Predicted Functional Partners:
CKAN_00052300
Alpha-1,4-fucosyltransferase.
    
 0.885
CKAN_00611200
Beta-galactosidase.
  
 
 0.872
CKAN_01464900
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
     
 0.871
CKAN_02611100
Beta-hexosaminidase.
  
  
0.861
CKAN_01469700
Mannosyltransferase.
     
 0.841
CKAN_01916800
Glycoprotein 3-alpha-L-fucosyltransferase A-like protein.
    
 0.840
CKAN_02177800
Glycoprotein 3-alpha-L-fucosyltransferase A-like protein.
    
 0.840
CKAN_02396200
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 0.834
CKAN_01064900
Alpha 1,4-glycosyltransferase domain-containing protein.
   
 
  0.826
CKAN_01708600
Chitotriosidase-1-like protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.821
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.