Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00215900 | CKAN_00761100 | A0A3S3NRN4 | A0A443NKM5 | Plant cysteine oxidase 2. | Nucleolar transcription factor 1-B-like protein isoform X2. | 0.458 |
CKAN_00215900 | CKAN_00794800 | A0A3S3NRN4 | A0A3S3NGT2 | Plant cysteine oxidase 2. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.406 |
CKAN_00215900 | CKAN_01031000 | A0A3S3NRN4 | A0A3S3NKK7 | Plant cysteine oxidase 2. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.438 |
CKAN_00215900 | CKAN_01099400 | A0A3S3NRN4 | A0A3S3QA93 | Plant cysteine oxidase 2. | Serine decarboxylase-like protein. | 0.564 |
CKAN_00215900 | CKAN_01411600 | A0A3S3NRN4 | A0A443P3F8 | Plant cysteine oxidase 2. | Serine decarboxylase-like protein. | 0.564 |
CKAN_00215900 | CKAN_01411900 | A0A3S3NRN4 | A0A443P3A2 | Plant cysteine oxidase 2. | Serine decarboxylase-like protein. | 0.564 |
CKAN_00215900 | CKAN_01645600 | A0A3S3NRN4 | A0A443P9Q6 | Plant cysteine oxidase 2. | Methionine aminopeptidase 1A. | 0.406 |
CKAN_00761100 | CKAN_00215900 | A0A443NKM5 | A0A3S3NRN4 | Nucleolar transcription factor 1-B-like protein isoform X2. | Plant cysteine oxidase 2. | 0.458 |
CKAN_00761100 | CKAN_01031000 | A0A443NKM5 | A0A3S3NKK7 | Nucleolar transcription factor 1-B-like protein isoform X2. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.606 |
CKAN_00794800 | CKAN_00215900 | A0A3S3NGT2 | A0A3S3NRN4 | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Plant cysteine oxidase 2. | 0.406 |
CKAN_01031000 | CKAN_00215900 | A0A3S3NKK7 | A0A3S3NRN4 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Plant cysteine oxidase 2. | 0.438 |
CKAN_01031000 | CKAN_00761100 | A0A3S3NKK7 | A0A443NKM5 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Nucleolar transcription factor 1-B-like protein isoform X2. | 0.606 |
CKAN_01099400 | CKAN_00215900 | A0A3S3QA93 | A0A3S3NRN4 | Serine decarboxylase-like protein. | Plant cysteine oxidase 2. | 0.564 |
CKAN_01411600 | CKAN_00215900 | A0A443P3F8 | A0A3S3NRN4 | Serine decarboxylase-like protein. | Plant cysteine oxidase 2. | 0.564 |
CKAN_01411900 | CKAN_00215900 | A0A443P3A2 | A0A3S3NRN4 | Serine decarboxylase-like protein. | Plant cysteine oxidase 2. | 0.564 |
CKAN_01645600 | CKAN_00215900 | A0A443P9Q6 | A0A3S3NRN4 | Methionine aminopeptidase 1A. | Plant cysteine oxidase 2. | 0.406 |