STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02689800Arogenate dehydrogenase 2, chloroplastic-like protein. (413 aa)    
Predicted Functional Partners:
CKAN_02495100
Histidinol-phosphate aminotransferase, chloroplastic isoform X1.
  
 
 0.983
CKAN_01213100
Chorismate synthase.
  
 0.958
CKAN_01213200
Chorismate synthase.
  
 0.958
CKAN_01384100
Protein PHYLLO, chloroplastic isoform X1.
    
 0.918
CKAN_01654600
Arogenate dehydratase 3, chloroplastic-like protein.
 
 
 0.903
CKAN_00347000
Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1.
    
 0.896
CKAN_00536900
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
 
 
 0.889
CKAN_02445100
Arogenate dehydratase/prephenate dehydratase 2, chloroplastic-like protein.
 
 
 0.888
CKAN_00584000
Aspartate aminotransferase.
    
 0.886
CKAN_00123000
Chorismate mutase.
  
 0.878
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.