Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00389000 | CKAN_01623300 | A0A3S3PYY9 | A0A443P981 | RING/U-box superfamily protein. | BZIP transcription factor 16 isoform X3. | 0.443 |
CKAN_00389000 | CKAN_02541500 | A0A3S3PYY9 | A0A3S3NWW0 | RING/U-box superfamily protein. | Transcription factor MYB59-like protein. | 0.405 |
CKAN_00838400 | CKAN_02541500 | A0A3S3Q5N6 | A0A3S3NWW0 | SANT/Myb domain-containing protein. | Transcription factor MYB59-like protein. | 0.586 |
CKAN_01623300 | CKAN_00389000 | A0A443P981 | A0A3S3PYY9 | BZIP transcription factor 16 isoform X3. | RING/U-box superfamily protein. | 0.443 |
CKAN_01623300 | CKAN_02541500 | A0A443P981 | A0A3S3NWW0 | BZIP transcription factor 16 isoform X3. | Transcription factor MYB59-like protein. | 0.408 |
CKAN_02541500 | CKAN_00389000 | A0A3S3NWW0 | A0A3S3PYY9 | Transcription factor MYB59-like protein. | RING/U-box superfamily protein. | 0.405 |
CKAN_02541500 | CKAN_00838400 | A0A3S3NWW0 | A0A3S3Q5N6 | Transcription factor MYB59-like protein. | SANT/Myb domain-containing protein. | 0.586 |
CKAN_02541500 | CKAN_01623300 | A0A3S3NWW0 | A0A443P981 | Transcription factor MYB59-like protein. | BZIP transcription factor 16 isoform X3. | 0.408 |