STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01756200Putative gamma-aminobutyrate transaminase 3, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (522 aa)    
Predicted Functional Partners:
CKAN_01502300
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.967
CKAN_02197100
Aldehyde dehydrogenase NADP-dependent; Belongs to the aldehyde dehydrogenase family.
  
 0.928
CKAN_02523600
Aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.928
CKAN_02609200
6-phosphogluconate dehydrogenase.
   
 
 0.925
CKAN_00563000
Ketose-bisphosphate aldolase.
  
 
 0.918
CKAN_01404000
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 0.910
CKAN_01403900
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 0.910
CKAN_01401100
Aldehyde dehydrogenase family 2 member B7, mitochondrial; Belongs to the aldehyde dehydrogenase family.
 
 0.908
CKAN_02423600
Aldehyde dehydrogenase family 2 member B7, mitochondrial; Belongs to the aldehyde dehydrogenase family.
 
 0.908
CKAN_01205800
Aldehyde dehydrogenase family 2 member B7, mitochondrial-like protein; Belongs to the aldehyde dehydrogenase family.
 
 0.908
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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