STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01839200SPX domain-containing protein. (698 aa)    
Predicted Functional Partners:
CKAN_00832900
UDP-N-acetylglucosamine transferase subunit ALG13 isoform X1.
     
 0.880
CKAN_00782600
Putative 26S proteasome non-ATPase regulatory subunit 3.
     
 0.872
CKAN_02157100
Putative 26S proteasome non-ATPase regulatory subunit 3.
     
 0.872
CKAN_00782400
Putative 26S proteasome non-ATPase regulatory subunit 3.
     
 0.872
CKAN_00675700
Peptidase M28 family protein isoform 2.
   
 
 0.866
CKAN_01144100
Putative glutamate carboxypeptidase 2.
   
 
 0.866
CKAN_01085300
Putative glutamate carboxypeptidase 2 isoform X1.
   
 
 0.866
CKAN_00287100
Endoplasmic reticulum metallopeptidase 1 isoform X1.
   
 
 0.813
CKAN_02606100
Peptidase M28.
   
 
 0.813
CKAN_00851900
SET domain-containing protein.
     
 0.728
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.