STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00636100Aldehyde oxidase GLOX1. (582 aa)    
Predicted Functional Partners:
CKAN_01579200
ATP-dependent DNA helicase mph1 isoform X1.
    
 0.964
CKAN_01878800
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.940
CKAN_00533700
Uncharacterized protein.
    
 0.938
CKAN_02456500
Ribonuclease P/MRP.
    
 0.938
CKAN_01122500
E3 ubiquitin-protein ligase FANCL isoform X1.
    
 0.934
CKAN_00290300
DUF4477 domain-containing protein.
    
 0.933
CKAN_00945800
DNA excision repair protein ERCC-1 isoform X1.
    
 0.929
CKAN_02467800
NPL4-like protein 2.
    
 0.918
CKAN_00448200
DNA repair endonuclease UVH1.
   
 0.917
CKAN_00448500
ERCC4 domain-containing protein.
   
 0.917
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.