STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02676300GDP-L-galactose phosphorylase. (434 aa)    
Predicted Functional Partners:
CKAN_00067200
Bifunctional phosphatase IMPL2, chloroplastic-like protein.
     
 0.924
CKAN_00963200
GDP-mannose 3,5-epimerase 1.
     
 0.880
CKAN_01690900
GDP-mannose 3,5-epimerase 1.
     
 0.880
CKAN_00006100
Inositol-1-monophosphatase.
     
 0.879
CKAN_00475900
Inositol-1-monophosphatase.
     
 0.879
CKAN_01468700
GDP-L-galactose phosphorylase 1-like protein.
  
  
 
0.826
CKAN_01055200
GDP-L-galactose phosphorylase 1 isoform X2.
  
  
 
0.825
CKAN_01459400
Inositol-1-monophosphatase.
     
 0.745
CKAN_02151200
LisH domain-containing protein ARMC9-like protein.
    
 
 0.649
CKAN_00842900
Zinc finger protein 830.
     
 0.587
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.