Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00006800 | CKAN_00616700 | A0A443N049 | A0A3S3MJQ3 | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | Squalene/phytoene synthase. | 0.864 |
CKAN_00006800 | CKAN_00704100 | A0A443N049 | A0A3S3NZW3 | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | Alkyl transferase; Belongs to the UPP synthase family. | 0.971 |
CKAN_00006800 | CKAN_00909800 | A0A443N049 | A0A443NPN5 | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.889 |
CKAN_00006800 | CKAN_01137200 | A0A443N049 | A0A3S3MMH1 | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | Squalene synthase. | 0.864 |
CKAN_00006800 | CKAN_01215200 | A0A443N049 | A0A443NXY1 | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.829 |
CKAN_00006800 | CKAN_01230400 | A0A443N049 | A0A3S3MH10 | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like protein; Belongs to the FPP/GGPP synthase family. | 0.876 |
CKAN_00006800 | CKAN_01262200 | A0A443N049 | A0A443NZ75 | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. | 0.860 |
CKAN_00006800 | CKAN_02433600 | A0A443N049 | A0A3S3NV35 | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | Fanesyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.829 |
CKAN_00616700 | CKAN_00006800 | A0A3S3MJQ3 | A0A443N049 | Squalene/phytoene synthase. | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | 0.864 |
CKAN_00616700 | CKAN_00704100 | A0A3S3MJQ3 | A0A3S3NZW3 | Squalene/phytoene synthase. | Alkyl transferase; Belongs to the UPP synthase family. | 0.894 |
CKAN_00616700 | CKAN_00909800 | A0A3S3MJQ3 | A0A443NPN5 | Squalene/phytoene synthase. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.886 |
CKAN_00616700 | CKAN_01215200 | A0A3S3MJQ3 | A0A443NXY1 | Squalene/phytoene synthase. | Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.940 |
CKAN_00616700 | CKAN_01230400 | A0A3S3MJQ3 | A0A3S3MH10 | Squalene/phytoene synthase. | Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like protein; Belongs to the FPP/GGPP synthase family. | 0.940 |
CKAN_00616700 | CKAN_01262200 | A0A3S3MJQ3 | A0A443NZ75 | Squalene/phytoene synthase. | Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. | 0.889 |
CKAN_00616700 | CKAN_02282500 | A0A3S3MJQ3 | A0A443PS62 | Squalene/phytoene synthase. | Dehydrodolichyl diphosphate synthase complex subunit NUS1. | 0.864 |
CKAN_00616700 | CKAN_02433600 | A0A3S3MJQ3 | A0A3S3NV35 | Squalene/phytoene synthase. | Fanesyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.940 |
CKAN_00616700 | CKAN_02654000 | A0A3S3MJQ3 | A0A3S3PAL3 | Squalene/phytoene synthase. | Dehydrodolichyl diphosphate synthase complex subunit NUS1. | 0.864 |
CKAN_00704100 | CKAN_00006800 | A0A3S3NZW3 | A0A443N049 | Alkyl transferase; Belongs to the UPP synthase family. | Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1. | 0.971 |
CKAN_00704100 | CKAN_00616700 | A0A3S3NZW3 | A0A3S3MJQ3 | Alkyl transferase; Belongs to the UPP synthase family. | Squalene/phytoene synthase. | 0.894 |
CKAN_00704100 | CKAN_00909800 | A0A3S3NZW3 | A0A443NPN5 | Alkyl transferase; Belongs to the UPP synthase family. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.924 |
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