Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00244400 | CKAN_00901200 | A0A443N6H5 | A0A443NPE7 | Transcription initiation factor TFIID subunit 8, putative isoform 1. | TATA-box-binding protein. | 0.961 |
CKAN_00244400 | CKAN_01089200 | A0A443N6H5 | A0A3S3MTM5 | Transcription initiation factor TFIID subunit 8, putative isoform 1. | TATA-box-binding protein. | 0.961 |
CKAN_00244400 | CKAN_01938000 | A0A443N6H5 | A0A3S3P0B0 | Transcription initiation factor TFIID subunit 8, putative isoform 1. | Signal transduction response regulator. | 0.487 |
CKAN_00244400 | CKAN_02501500 | A0A443N6H5 | A0A3S4PWC7 | Transcription initiation factor TFIID subunit 8, putative isoform 1. | SET domain-containing protein. | 0.887 |
CKAN_00346100 | CKAN_00505600 | A0A443N9E3 | A0A443NDK5 | Signal transduction response regulator. | Histidine-containing phosphotransfer protein 1 isoform X1. | 0.907 |
CKAN_00346100 | CKAN_01595600 | A0A443N9E3 | A0A443P8H3 | Signal transduction response regulator. | Histidine kinase 3-like protein. | 0.902 |
CKAN_00346100 | CKAN_01938000 | A0A443N9E3 | A0A3S3P0B0 | Signal transduction response regulator. | Signal transduction response regulator. | 0.488 |
CKAN_00346100 | CKAN_02291800 | A0A443N9E3 | A0A443PSF0 | Signal transduction response regulator. | Histidine-containing phosphotransfer protein 1 isoform X1. | 0.907 |
CKAN_00346100 | CKAN_02402200 | A0A443N9E3 | A0A3S3N2J9 | Signal transduction response regulator. | Histidine-containing phosphotransfer protein 1 isoform X1. | 0.907 |
CKAN_00505600 | CKAN_00346100 | A0A443NDK5 | A0A443N9E3 | Histidine-containing phosphotransfer protein 1 isoform X1. | Signal transduction response regulator. | 0.907 |
CKAN_00505600 | CKAN_01595600 | A0A443NDK5 | A0A443P8H3 | Histidine-containing phosphotransfer protein 1 isoform X1. | Histidine kinase 3-like protein. | 0.916 |
CKAN_00505600 | CKAN_01938000 | A0A443NDK5 | A0A3S3P0B0 | Histidine-containing phosphotransfer protein 1 isoform X1. | Signal transduction response regulator. | 0.511 |
CKAN_00901200 | CKAN_00244400 | A0A443NPE7 | A0A443N6H5 | TATA-box-binding protein. | Transcription initiation factor TFIID subunit 8, putative isoform 1. | 0.961 |
CKAN_00901200 | CKAN_01689400 | A0A443NPE7 | A0A443PB18 | TATA-box-binding protein. | Histone acetyltransferase GCN5 isoform X2. | 0.961 |
CKAN_00901200 | CKAN_01938000 | A0A443NPE7 | A0A3S3P0B0 | TATA-box-binding protein. | Signal transduction response regulator. | 0.491 |
CKAN_00901200 | CKAN_02501500 | A0A443NPE7 | A0A3S4PWC7 | TATA-box-binding protein. | SET domain-containing protein. | 0.771 |
CKAN_01089200 | CKAN_00244400 | A0A3S3MTM5 | A0A443N6H5 | TATA-box-binding protein. | Transcription initiation factor TFIID subunit 8, putative isoform 1. | 0.961 |
CKAN_01089200 | CKAN_01689400 | A0A3S3MTM5 | A0A443PB18 | TATA-box-binding protein. | Histone acetyltransferase GCN5 isoform X2. | 0.961 |
CKAN_01089200 | CKAN_01938000 | A0A3S3MTM5 | A0A3S3P0B0 | TATA-box-binding protein. | Signal transduction response regulator. | 0.491 |
CKAN_01089200 | CKAN_02501500 | A0A3S3MTM5 | A0A3S4PWC7 | TATA-box-binding protein. | SET domain-containing protein. | 0.771 |
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