STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01946300Aquaporin TIP3-1-like protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (254 aa)    
Predicted Functional Partners:
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
  
 0.744
CKAN_02556700
Katanin p60 ATPase-containing subunit A-like protein 2 isoform X1.
  
 0.744
CKAN_00059500
26S protease regulatory subunit 8 A.
  
 0.740
CKAN_00152500
26S protease regulatory subunit 8 A-like protein; Belongs to the AAA ATPase family.
  
 0.740
CKAN_00015000
ATPase family AAA domain-containing protein isoform X2.
  
 0.740
CKAN_01332600
26S proteasome regulatory subunit 7A; Belongs to the AAA ATPase family.
  
 0.740
CKAN_00059100
26S protease regulatory subunit 8 A; Belongs to the AAA ATPase family.
  
 0.740
CKAN_01810300
AT-hook motif nuclear-localized protein 16-like protein.
  
 0.740
CKAN_02516800
26S protease regulatory subunit 7A; Belongs to the AAA ATPase family.
  
 0.740
CKAN_00370800
26S proteasome regulatory subunit 4 A; Belongs to the AAA ATPase family.
  
 0.740
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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