STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01029300Pumilio 2-like protein. (1034 aa)    
Predicted Functional Partners:
CKAN_00723900
Cytochrome c oxidase copper chaperone 2.
    
 
 0.728
CKAN_02190800
Cytochrome c oxidase copper chaperone 1.
    
 
 0.728
CKAN_00498200
Acyl-CoA-binding domain-containing protein 4-like protein isoform X2.
   
   0.722
CKAN_02342200
Acyl-CoA-binding domain-containing protein 4-like protein isoform X2.
   
   0.722
CKAN_00557500
Protein LSM12 A.
    
   0.707
CKAN_02580600
Prohibitin.
    
   0.649
CKAN_00894000
Mitochondrial distribution/morphology family 35/apoptosis.
    
   0.646
CKAN_00558700
RING-H2 finger protein ATL48-like protein.
    
   0.599
CKAN_00558800
RING-H2 finger protein ATL48-like protein.
    
   0.599
CKAN_00032200
Mitochondrial import receptor subunit TOM9-2-like protein.
    
 
 0.546
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.