STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01083400Multifunctional methyltransferase subunit TRM112-like protein. (122 aa)    
Predicted Functional Partners:
CKAN_02330600
HemK methyltransferase family member 2.
    
 0.999
CKAN_01297800
tRNA guanine10-N2-methyltransferase.
   
 0.990
CKAN_00160000
Putative 18S rRNA guanine-N7-methyltransferase.
   
 0.987
CKAN_01243500
Putative 18S rRNA guanine-N7-methyltransferase.
   
 0.987
CKAN_01777800
Release factor glutamine methyltransferase isoform X2.
    
 0.984
CKAN_01587900
Alkylated DNA repair protein alkB 8.
   
 0.976
CKAN_01391800
tRNA wybutosine-synthesizing protein 2/3/4 isoform X2.
   
 
 0.971
CKAN_00173600
Methyltransferase-like protein 5.
    
 
 0.962
CKAN_01212700
Ribosomal protein S4/S9.
   
   0.948
CKAN_00035100
Bystin.
   
 
 0.948
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.