STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02170700Mitochondrial uncoupling protein 5; Belongs to the mitochondrial carrier (TC 2.A.29) family. (327 aa)    
Predicted Functional Partners:
CKAN_01009700
Phenylalanine--tRNA ligase, chloroplastic/mitochondrial.
 
 
    0.640
CKAN_00365500
ABC transporter I family member 17.
    
 
 0.481
CKAN_02123400
Expansin-B16-like protein; Belongs to the expansin family.
      
 0.475
CKAN_02627700
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
  
 0.468
CKAN_02126800
Ultraviolet-B receptor UVR8.
    
 
 0.446
CKAN_00365200
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
   
  
 0.433
CKAN_00135200
Conserved oligomeric Golgi complex subunit 3 isoform X1.
 
      0.429
CKAN_02437500
Cytochrome c oxidase assembly protein COX15.
   
 
 0.428
CKAN_02601300
CRIB domain-containing protein RIC6-like protein.
      
 0.408
CKAN_01306700
SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family.
    
   0.407
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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