Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00102600 | CKAN_01598200 | A0A3S3LWE9 | A0A3S3N2K5 | Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.531 |
CKAN_00102600 | CKAN_02282800 | A0A3S3LWE9 | A0A3S3P537 | Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | EF-hand domain-containing protein. | 0.911 |
CKAN_00341700 | CKAN_01069500 | A0A443N959 | A0A3S3ME77 | DNA repair protein RAD4 isoform X1. | Cyclin-H1-1 isoform X1; Belongs to the cyclin family. | 0.888 |
CKAN_00341700 | CKAN_01681500 | A0A443N959 | A0A3S3NHQ4 | DNA repair protein RAD4 isoform X1. | DNA repair helicase XPB1. | 0.986 |
CKAN_00341700 | CKAN_02282800 | A0A443N959 | A0A3S3P537 | DNA repair protein RAD4 isoform X1. | EF-hand domain-containing protein. | 0.937 |
CKAN_00449500 | CKAN_00656700 | A0A3S3NB03 | A0A443NHS0 | SAC3 family protein C. | Enhanced ethylene response protein 5. | 0.947 |
CKAN_00449500 | CKAN_01598200 | A0A3S3NB03 | A0A3S3N2K5 | SAC3 family protein C. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.951 |
CKAN_00449500 | CKAN_02282800 | A0A3S3NB03 | A0A3S3P537 | SAC3 family protein C. | EF-hand domain-containing protein. | 0.807 |
CKAN_00508100 | CKAN_00656700 | A0A3S3NWM5 | A0A443NHS0 | SAC3/GANP/Nin1/mts3/eIF-3 p25. | Enhanced ethylene response protein 5. | 0.947 |
CKAN_00508100 | CKAN_01598200 | A0A3S3NWM5 | A0A3S3N2K5 | SAC3/GANP/Nin1/mts3/eIF-3 p25. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.951 |
CKAN_00508100 | CKAN_02282800 | A0A3S3NWM5 | A0A3S3P537 | SAC3/GANP/Nin1/mts3/eIF-3 p25. | EF-hand domain-containing protein. | 0.807 |
CKAN_00656700 | CKAN_00449500 | A0A443NHS0 | A0A3S3NB03 | Enhanced ethylene response protein 5. | SAC3 family protein C. | 0.947 |
CKAN_00656700 | CKAN_00508100 | A0A443NHS0 | A0A3S3NWM5 | Enhanced ethylene response protein 5. | SAC3/GANP/Nin1/mts3/eIF-3 p25. | 0.947 |
CKAN_00656700 | CKAN_01598200 | A0A443NHS0 | A0A3S3N2K5 | Enhanced ethylene response protein 5. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.946 |
CKAN_00656700 | CKAN_02282800 | A0A443NHS0 | A0A3S3P537 | Enhanced ethylene response protein 5. | EF-hand domain-containing protein. | 0.808 |
CKAN_00840600 | CKAN_02282800 | A0A3S3MNY6 | A0A3S3P537 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase. | EF-hand domain-containing protein. | 0.763 |
CKAN_00840800 | CKAN_02282800 | A0A3S3MH45 | A0A3S3P537 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase. | EF-hand domain-containing protein. | 0.763 |
CKAN_01069500 | CKAN_00341700 | A0A3S3ME77 | A0A443N959 | Cyclin-H1-1 isoform X1; Belongs to the cyclin family. | DNA repair protein RAD4 isoform X1. | 0.888 |
CKAN_01069500 | CKAN_01681500 | A0A3S3ME77 | A0A3S3NHQ4 | Cyclin-H1-1 isoform X1; Belongs to the cyclin family. | DNA repair helicase XPB1. | 0.991 |
CKAN_01069500 | CKAN_02282800 | A0A3S3ME77 | A0A3S3P537 | Cyclin-H1-1 isoform X1; Belongs to the cyclin family. | EF-hand domain-containing protein. | 0.723 |
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