STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02284800Putative GTP-binding protein OBGM, mitochondrial. (558 aa)    
Predicted Functional Partners:
CKAN_01502300
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.949
CKAN_00363300
Protein Iojap-related, mitochondrial isoform X2.
  
 
 0.938
CKAN_01282400
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.910
CKAN_01295200
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.910
CKAN_00865100
50S ribosomal protein L27, chloroplastic.
  
 
 0.899
CKAN_02508000
50S ribosomal protein L27-like protein isoform X1.
  
 
 0.899
CKAN_02657800
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.878
CKAN_01819600
50S ribosomal protein L21, mitochondrial-like protein isoform X1.
  
 
 0.861
CKAN_00317900
50S ribosomal protein L21, chloroplastic.
  
 
 0.861
CKAN_02414200
50S ribosomal protein L17, chloroplastic-like protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.857
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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