STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01388300Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (497 aa)    
Predicted Functional Partners:
CKAN_01502300
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.995
CKAN_01873400
Urea-proton symporter DUR3; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.986
CKAN_00735600
Putative aldehyde dehydrogenase.
  
 0.961
CKAN_00277600
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
   
 0.950
CKAN_01833100
Arginase 1, mitochondrial; Belongs to the arginase family.
  
 
 0.949
CKAN_01851600
Delta1-pyrroline-2-carboxylate reductase.
  
 
 0.948
CKAN_02507800
4Fe-4S binding domain-containing protein.
     
 0.934
CKAN_00638200
NADPH:adrenodoxin oxidoreductase, mitochondrial.
     
 0.928
CKAN_02264500
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 
 0.919
CKAN_01612300
Prolyl 4-hydroxylase 1 isoform X1.
   
 
 0.915
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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