STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01394600Septum-promoting GTP-binding protein 1. (271 aa)    
Predicted Functional Partners:
CKAN_00350800
Protein NRDE2.
    
 0.993
CKAN_00003200
Growth hormone-regulated TBC protein 1 isoform X1.
   
 0.970
CKAN_01474400
Rab-GTPase-TBC domain-containing protein.
   
 0.970
CKAN_00535600
Rab-GTPase-TBC domain-containing protein.
   
 0.970
CKAN_00473400
Growth hormone-regulated TBC protein 1-like protein isoform X1.
   
 0.970
CKAN_02487200
Rab-GTPase-TBC domain-containing protein.
   
 0.970
CKAN_02307400
E3 ubiquitin-protein ligase KEG isoform X2.
   
 0.961
CKAN_01801800
Uncharacterized protein.
   
 0.918
CKAN_02339100
Uncharacterized protein.
   
 0.918
CKAN_00102600
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.916
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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