CKAN_01469800 protein (Cinnamomum micranthum)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Score

CKAN_01469800

Ankyrin repeat-containing-like protein. (266 aa)

Predicted Functional Partners:

CKAN_00102600

0.772

CKAN_00504600

0.615

CKAN_02467900

0.615

CKAN_01115700

0.614

CKAN_02501500

0.575

CKAN_01976700

0.569

CKAN_01845700

0.548

CKAN_00022900

0.527

CKAN_02704200

0.517

CKAN_00331400

0.512

Your Current Organism:

Cinnamomum micranthum

NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CKAN_00022900	CKAN_00102600	A0A3S3N3J3	A0A3S3LWE9	Ankyrin-3-like protein.	Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.772
CKAN_00022900	CKAN_00331400	A0A3S3N3J3	A0A3S3PWQ8	Ankyrin-3-like protein.	Tankyrase-2.	0.522
CKAN_00022900	CKAN_00504600	A0A3S3N3J3	A0A443NDI4	Ankyrin-3-like protein.	Serine/threonine-protein phosphatase.	0.615
CKAN_00022900	CKAN_01115700	A0A3S3N3J3	A0A3S3N7X2	Ankyrin-3-like protein.	Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.	0.614
CKAN_00022900	CKAN_01469800	A0A3S3N3J3	A0A3S3P941	Ankyrin-3-like protein.	Ankyrin repeat-containing-like protein.	0.527
CKAN_00022900	CKAN_01976700	A0A3S3N3J3	A0A443PIS1	Ankyrin-3-like protein.	Ankyrin repeat domain-containing protein, chloroplastic isoform X2.	0.609
CKAN_00022900	CKAN_02467900	A0A3S3N3J3	A0A443PX68	Ankyrin-3-like protein.	Serine/threonine-protein phosphatase.	0.615
CKAN_00022900	CKAN_02501500	A0A3S3N3J3	A0A3S4PWC7	Ankyrin-3-like protein.	SET domain-containing protein.	0.575
CKAN_00022900	CKAN_02704200	A0A3S3N3J3	A0A3S3PBF6	Ankyrin-3-like protein.	E3 ubiquitin-protein ligase PRT1-like protein.	0.517
CKAN_00102600	CKAN_00022900	A0A3S3LWE9	A0A3S3N3J3	Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Ankyrin-3-like protein.	0.772
CKAN_00102600	CKAN_00331400	A0A3S3LWE9	A0A3S3PWQ8	Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Tankyrase-2.	0.772
CKAN_00102600	CKAN_01469800	A0A3S3LWE9	A0A3S3P941	Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Ankyrin repeat-containing-like protein.	0.772
CKAN_00102600	CKAN_01845700	A0A3S3LWE9	A0A3S3MTC0	Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Ankyrin-1 isoform X1.	0.967
CKAN_00102600	CKAN_01976700	A0A3S3LWE9	A0A443PIS1	Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Ankyrin repeat domain-containing protein, chloroplastic isoform X2.	0.772
CKAN_00102600	CKAN_02704200	A0A3S3LWE9	A0A3S3PBF6	Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	E3 ubiquitin-protein ligase PRT1-like protein.	0.401
CKAN_00331400	CKAN_00022900	A0A3S3PWQ8	A0A3S3N3J3	Tankyrase-2.	Ankyrin-3-like protein.	0.522
CKAN_00331400	CKAN_00102600	A0A3S3PWQ8	A0A3S3LWE9	Tankyrase-2.	Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.772
CKAN_00331400	CKAN_00504600	A0A3S3PWQ8	A0A443NDI4	Tankyrase-2.	Serine/threonine-protein phosphatase.	0.615
CKAN_00331400	CKAN_01115700	A0A3S3PWQ8	A0A3S3N7X2	Tankyrase-2.	Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.	0.614
CKAN_00331400	CKAN_01469800	A0A3S3PWQ8	A0A3S3P941	Tankyrase-2.	Ankyrin repeat-containing-like protein.	0.512

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Network Stats

number of nodes:

11

number of edges:

47

average node degree:

8.55

avg. local clustering coefficient:

0.858

expected number of edges:

16

PPI enrichment p-value:

1.71e-10

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0051287

NAD binding

3 of 16

1.94

1.83

0.0018

GO:0016616

Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

3 of 20

1.84

1.77

0.0018

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1086

Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain, and Aminotransferase class-V, pyridoxal-phosphate binding site

4 of 7

2.42

4.51

2.90e-07

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00680

Methane metabolism

2 of 19

1.69

0.98

0.0355

map01120

Microbial metabolism in diverse environments

4 of 141

1.12

0.95

0.0035

map00260

Glycine, serine and threonine metabolism

2 of 27

1.53

0.87

0.0455

map00270

Cysteine and methionine metabolism

2 of 31

1.47

0.84

0.0455

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF02826

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

3 of 3

2.66

3.49

1.99e-05

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR006140

D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain

3 of 3

2.66

3.16

5.85e-05

IPR029753

D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site

2 of 2

2.66

1.6

0.0081

IPR006139

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

2 of 2

2.66

1.6

0.0081

IPR036291

NAD(P)-binding domain superfamily

3 of 34

1.61

1.28

0.0081

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