STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02615500Ion channel CASTOR isoform X2. (930 aa)    
Predicted Functional Partners:
CKAN_01265900
BZIP transcription factor family protein 11.
    
 0.804
CKAN_02617900
Putative transcription factor PosF21 isoform X1.
    
 0.804
CKAN_01265700
Basic-leucine zipper domain-containing protein.
    
 0.804
CKAN_01572700
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.599
CKAN_02166200
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.599
CKAN_00787500
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.599
CKAN_01391800
tRNA wybutosine-synthesizing protein 2/3/4 isoform X2.
      
 0.510
CKAN_02333700
JmjC domain-containing protein.
      
 0.420
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.