STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_0181890026S proteasome non-ATPase regulatory subunit 5. (903 aa)    
Predicted Functional Partners:
CKAN_02438500
26S proteasome non-ATPase regulatory subunit 4.
    
 0.991
CKAN_01301900
Regulatory particle non-ATPase 13.
    
 0.989
CKAN_00073300
26S proteasome non-ATPase regulatory subunit 12 A.
   
 0.983
CKAN_00186000
26S proteasome non-ATPase regulatory subunit 12 A.
   
 0.983
CKAN_02046600
26S proteasome non-ATPase regulatory subunit 7 A.
   
 0.981
CKAN_01940700
26S proteasome non-ATPase regulatory subunit 7 A.
   
 0.981
CKAN_00763800
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
 0.980
CKAN_00370800
26S proteasome regulatory subunit 4 A; Belongs to the AAA ATPase family.
    
 0.980
CKAN_01133700
AAA+ ATPase domain-containing protein; Belongs to the AAA ATPase family.
    
 0.980
CKAN_00903800
Proteasome component PCI domain-containing protein.
   
 0.979
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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