Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00015900 | CKAN_00730000 | A0A443N0E7 | A0A443NJQ9 | Biotin synthase. | Long chain base biosynthesis protein 2a. | 0.913 |
CKAN_00015900 | CKAN_01484000 | A0A443N0E7 | A0A3S3QKP1 | Biotin synthase. | Long chain base biosynthesis protein 2a-like protein. | 0.913 |
CKAN_00015900 | CKAN_01860600 | A0A443N0E7 | A0A3S3PFI5 | Biotin synthase. | Long chain base biosynthesis protein 1. | 0.913 |
CKAN_00077800 | CKAN_00239100 | A0A443N210 | A0A3S3MHY1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.889 |
CKAN_00077800 | CKAN_00730000 | A0A443N210 | A0A443NJQ9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Long chain base biosynthesis protein 2a. | 0.906 |
CKAN_00077800 | CKAN_00771400 | A0A443N210 | A0A443NKS3 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Threonine dehydratase. | 0.912 |
CKAN_00077800 | CKAN_00962500 | A0A443N210 | A0A443NR15 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Tryptophan synthase alpha chain-like protein; Belongs to the TrpA family. | 0.923 |
CKAN_00077800 | CKAN_01226800 | A0A443N210 | A0A443NYF2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.880 |
CKAN_00077800 | CKAN_01395000 | A0A443N210 | A0A443P2U2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Tryptophan synthase. | 0.936 |
CKAN_00077800 | CKAN_01484000 | A0A443N210 | A0A3S3QKP1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Long chain base biosynthesis protein 2a-like protein. | 0.906 |
CKAN_00077800 | CKAN_01860600 | A0A443N210 | A0A3S3PFI5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Long chain base biosynthesis protein 1. | 0.906 |
CKAN_00077800 | CKAN_02101200 | A0A443N210 | A0A3S3NBG8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine racemase. | 0.902 |
CKAN_00239100 | CKAN_00077800 | A0A3S3MHY1 | A0A443N210 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.889 |
CKAN_00239100 | CKAN_00730000 | A0A3S3MHY1 | A0A443NJQ9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Long chain base biosynthesis protein 2a. | 0.906 |
CKAN_00239100 | CKAN_00771400 | A0A3S3MHY1 | A0A443NKS3 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Threonine dehydratase. | 0.912 |
CKAN_00239100 | CKAN_00962500 | A0A3S3MHY1 | A0A443NR15 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Tryptophan synthase alpha chain-like protein; Belongs to the TrpA family. | 0.923 |
CKAN_00239100 | CKAN_01226800 | A0A3S3MHY1 | A0A443NYF2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.882 |
CKAN_00239100 | CKAN_01395000 | A0A3S3MHY1 | A0A443P2U2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Tryptophan synthase. | 0.936 |
CKAN_00239100 | CKAN_01484000 | A0A3S3MHY1 | A0A3S3QKP1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Long chain base biosynthesis protein 2a-like protein. | 0.906 |
CKAN_00239100 | CKAN_01860600 | A0A3S3MHY1 | A0A3S3PFI5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Long chain base biosynthesis protein 1. | 0.906 |
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