STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01968400Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family. (960 aa)    
Predicted Functional Partners:
CKAN_02160900
Enoyl-CoA hydratase 2, peroxisomal.
   
 0.890
CKAN_02160800
Enoyl-CoA hydratase 2, peroxisomal.
   
 0.890
CKAN_02360700
MaoC-like domain-containing protein.
   
 0.890
CKAN_02665300
MaoC-like domain-containing protein.
   
 0.890
CKAN_01294800
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.867
CKAN_01916200
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.867
CKAN_00911000
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.859
CKAN_00087500
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 0.858
CKAN_00506700
Uncharacterized protein.
  
 0.858
CKAN_01216500
Superoxide dismutase Cu-Zn, chloroplastic.
  
 0.858
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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