Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00287600 | CKAN_00608300 | A0A443N7P0 | A0A443NGF9 | UPF0235 protein isoform X1. | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | 0.979 |
CKAN_00287600 | CKAN_01000800 | A0A443N7P0 | A0A3S3NK38 | UPF0235 protein isoform X1. | Mitochondrial succinate-fumarate transporter 1-like protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.979 |
CKAN_00287600 | CKAN_01001100 | A0A443N7P0 | A0A3S3MXB1 | UPF0235 protein isoform X1. | Mitochondrial succinate-fumarate transporter 1-like protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.979 |
CKAN_00287600 | CKAN_01009900 | A0A443N7P0 | A0A3S3MS45 | UPF0235 protein isoform X1. | Cysteine proteinase RD21A-like protein; Belongs to the peptidase C1 family. | 0.979 |
CKAN_00287600 | CKAN_01173700 | A0A443N7P0 | A0A443NWU8 | UPF0235 protein isoform X1. | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | 0.979 |
CKAN_00287600 | CKAN_01891600 | A0A443N7P0 | A0A3S3PG10 | UPF0235 protein isoform X1. | Developmentally-regulated G-protein 3. | 0.979 |
CKAN_00287600 | CKAN_02145100 | A0A443N7P0 | A0A3S3PJY2 | UPF0235 protein isoform X1. | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | 0.979 |
CKAN_00287600 | CKAN_02529700 | A0A443N7P0 | A0A443PYU8 | UPF0235 protein isoform X1. | DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. | 0.979 |
CKAN_00287600 | CKAN_02570900 | A0A443N7P0 | A0A3S3NPT9 | UPF0235 protein isoform X1. | Low-temperature-induced cysteine proteinase-like protein; Belongs to the peptidase C1 family. | 0.979 |
CKAN_00287600 | CKAN_02689000 | A0A443N7P0 | A0A443Q359 | UPF0235 protein isoform X1. | Low-temperature-induced cysteine proteinase-like protein; Belongs to the peptidase C1 family. | 0.979 |
CKAN_00608300 | CKAN_00287600 | A0A443NGF9 | A0A443N7P0 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | UPF0235 protein isoform X1. | 0.979 |
CKAN_00608300 | CKAN_01000800 | A0A443NGF9 | A0A3S3NK38 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | Mitochondrial succinate-fumarate transporter 1-like protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.902 |
CKAN_00608300 | CKAN_01001100 | A0A443NGF9 | A0A3S3MXB1 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | Mitochondrial succinate-fumarate transporter 1-like protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.902 |
CKAN_00608300 | CKAN_01009900 | A0A443NGF9 | A0A3S3MS45 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | Cysteine proteinase RD21A-like protein; Belongs to the peptidase C1 family. | 0.957 |
CKAN_00608300 | CKAN_01173700 | A0A443NGF9 | A0A443NWU8 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | 0.957 |
CKAN_00608300 | CKAN_01891600 | A0A443NGF9 | A0A3S3PG10 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | Developmentally-regulated G-protein 3. | 0.923 |
CKAN_00608300 | CKAN_02145100 | A0A443NGF9 | A0A3S3PJY2 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | 0.958 |
CKAN_00608300 | CKAN_02529700 | A0A443NGF9 | A0A443PYU8 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. | 0.923 |
CKAN_00608300 | CKAN_02570900 | A0A443NGF9 | A0A3S3NPT9 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | Low-temperature-induced cysteine proteinase-like protein; Belongs to the peptidase C1 family. | 0.958 |
CKAN_00608300 | CKAN_02689000 | A0A443NGF9 | A0A443Q359 | Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family. | Low-temperature-induced cysteine proteinase-like protein; Belongs to the peptidase C1 family. | 0.958 |
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