STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02242400Protein ENHANCED DISEASE RESISTANCE 4-like protein. (975 aa)    
Predicted Functional Partners:
CKAN_00771700
Protein GLE1.
    
 0.723
CKAN_00478100
Ribosomal protein S10.
   
   0.597
CKAN_01219400
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.595
CKAN_00079000
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.595
CKAN_01282300
40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.588
CKAN_00318000
Aladin isoform X2.
    
  0.572
CKAN_01517200
Nuclear-pore anchor-like protein isoform X3.
    
 0.556
CKAN_02242000
Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family.
    
  0.548
CKAN_01142200
Nuclear pore complex protein NUP35.
    
  0.546
CKAN_02533600
Nuclear pore complex protein NUP155.
    
  0.541
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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