STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02247300Uncharacterized protein. (511 aa)    
Predicted Functional Partners:
CKAN_00891500
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
    
 0.905
CKAN_02696400
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
    
 0.905
CKAN_00432500
Protein transport protein Sec61 subunit gamma.
   
 0.819
CKAN_00865500
Protein transport protein Sec61 subunit gamma-like protein.
   
 0.819
CKAN_00865600
Protein transport protein Sec61 subunit gamma-1-like protein.
   
 0.819
CKAN_00916300
Phosphatidylinositol 4-kinase alpha 1-like protein isoform X1; Belongs to the PI3/PI4-kinase family.
   
 0.810
CKAN_02396300
Signal recognition particle receptor subunit alpha.
    
 0.796
CKAN_01928100
Phosphatidylinositol 4-kinase beta 2-like protein isoform X1; Belongs to the PI3/PI4-kinase family.
   
 0.786
CKAN_02203700
Phosphatidylinositol 4-kinase beta 1 isoform X2; Belongs to the PI3/PI4-kinase family.
   
 0.786
CKAN_02147700
Peptidyl-prolyl cis-trans isomerase.
    
 0.673
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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