Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00257100 | CKAN_00900800 | A0A3S3MSY9 | A0A3S5WGM3 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic. | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | 0.956 |
CKAN_00257100 | CKAN_00964300 | A0A3S3MSY9 | A0A3S3P1U3 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic. | Methionine synthase. | 0.956 |
CKAN_00257100 | CKAN_01086200 | A0A3S3MSY9 | A0A443NUG5 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic. | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | 0.956 |
CKAN_00257100 | CKAN_01661000 | A0A3S3MSY9 | A0A3S3N967 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic. | Methionine gamma-lyase. | 0.950 |
CKAN_00257100 | CKAN_01797100 | A0A3S3MSY9 | A0A443PDV5 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic. | Homocysteine S-methyltransferase 2. | 0.952 |
CKAN_00257100 | CKAN_02370400 | A0A3S3MSY9 | A0A3S3PNB1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.916 |
CKAN_00257100 | CKAN_02513900 | A0A3S3MSY9 | A0A3S3R5R5 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic. | Homocysteine S-methyltransferase. | 0.952 |
CKAN_00768400 | CKAN_00900800 | A0A3S3N1P0 | A0A3S5WGM3 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | 0.956 |
CKAN_00768400 | CKAN_00964300 | A0A3S3N1P0 | A0A3S3P1U3 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methionine synthase. | 0.956 |
CKAN_00768400 | CKAN_01086200 | A0A3S3N1P0 | A0A443NUG5 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | 0.956 |
CKAN_00768400 | CKAN_01661000 | A0A3S3N1P0 | A0A3S3N967 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methionine gamma-lyase. | 0.960 |
CKAN_00768400 | CKAN_01797100 | A0A3S3N1P0 | A0A443PDV5 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Homocysteine S-methyltransferase 2. | 0.952 |
CKAN_00768400 | CKAN_02370400 | A0A3S3N1P0 | A0A3S3PNB1 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.916 |
CKAN_00768400 | CKAN_02513900 | A0A3S3N1P0 | A0A3S3R5R5 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Homocysteine S-methyltransferase. | 0.952 |
CKAN_00900800 | CKAN_00257100 | A0A3S5WGM3 | A0A3S3MSY9 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic. | 0.956 |
CKAN_00900800 | CKAN_00768400 | A0A3S5WGM3 | A0A3S3N1P0 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.956 |
CKAN_00900800 | CKAN_00964300 | A0A3S5WGM3 | A0A3S3P1U3 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | Methionine synthase. | 0.840 |
CKAN_00900800 | CKAN_01507100 | A0A3S5WGM3 | A0A3S3N0Y8 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | Methylenetetrahydrofolate reductase 1. | 0.956 |
CKAN_00900800 | CKAN_01661000 | A0A3S5WGM3 | A0A3S3N967 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | Methionine gamma-lyase. | 0.975 |
CKAN_00900800 | CKAN_01797100 | A0A3S5WGM3 | A0A443PDV5 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1. | Homocysteine S-methyltransferase 2. | 0.974 |
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