STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02387500Vacuolar protein sorting-associated protein 51. (779 aa)    
Predicted Functional Partners:
CKAN_02053600
Vacuolar protein sorting-associated protein 52 A-like protein isoform X1.
  
 0.984
CKAN_02076200
Vacuolar protein sorting-associated protein 54, chloroplastic.
   
 0.964
CKAN_00046100
Syndetin.
  
 
 
 0.959
CKAN_02608600
Syntaxin-52-like protein.
    
 0.925
CKAN_00524600
Target SNARE coiled-coil domain-containing protein.
    
 0.925
CKAN_01016600
Syntaxin-51-like protein.
    
 0.925
CKAN_01032700
Target SNARE coiled-coil domain-containing protein.
    
 0.925
CKAN_01969400
WD repeat-containing protein DWA2.
   
 
 0.887
CKAN_00288100
Conserved oligomeric Golgi complex subunit 2.
   
 
 0.860
CKAN_01810500
Conserved oligomeric Golgi complex subunit 5.
   
 
 0.852
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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