STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02488300Zinc finger CCCH domain-containing protein 11-like protein. (372 aa)    
Predicted Functional Partners:
CKAN_01891600
Developmentally-regulated G-protein 3.
   
 
 0.985
CKAN_00660300
Developmentally-regulated G-protein 2.
   
 
 0.947
CKAN_00478100
Ribosomal protein S10.
   
   0.829
CKAN_00009500
60S ribosomal protein L5-like protein.
   
   0.810
CKAN_01268400
60S ribosomal protein L5.
   
   0.810
CKAN_02206800
60S ribosomal protein L5.
   
   0.810
CKAN_02314200
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.804
CKAN_01421100
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.804
CKAN_02413000
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.804
CKAN_00287200
60S ribosomal protein L17-2; Belongs to the universal ribosomal protein uL22 family.
   
   0.802
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.